Assays

There are more than 200 pathogen assays now available in 22 different panels and more than 35 antimicrobial resistance assays available as panel add-ons. Our assays are open source which means they should work on most open source PCR platforms. We are working hard to make all of these assays available to you and you can learn more about which panels we currently have available by clicking on the panel link below.

  • Acinetobacter baumannii
  • Actinomyces*
  • Adenovirus
  • Aerococcus urinae*
  • Anaplasma phagocytophilum*
  • Arcanobacter hemolyticum*
  • Astrovirus*
  • Atopobium vaginae
  • Bacteroides fragilis
  • Bartonella henselae*
  • Bartonella quintana*
  • Bocavirus
  • Bordetella pertussis
  • Borrelia afzelii*
  • Borrelia burgdorferi*
  • Borrelia garinii*
  • Bourbon virus*
  • BVAB-2
  • Campylobacter jejuni*
  • Candida albicans
  • Candida dublinensis
  • Candida glabrata
  • Candida krusei
  • Candida lusitaniae
  • Candida parapsilosis
  • Candida tropicalis
  • Chlamydia trachomatis
  • Chlamydophila pneumoniae
  • Citrobacter braakii
  • Citrobacter freundii
  • Citrobacter koseri
  • Clostridium difficile*
  • Clostridium novyi/septicum*
  • Clostridium perfringens*
  • Coronavirus (229E, HKU1, NL63, OC43)
  • Corynebacterium amycolatum*
  • Corynebacterium striatum*
  • Corynebacterium urealyticum*
  • Coxsakievirus*
  • Cryptosporidium Parvum*
  • Echinococcus sp*
  • Echovirus*
  • Entamoeba histolytica*
  • Enterhemorrhagic Escherichia coli*
  • Enterobacter aerogenes
  • Enterobacter cloacae
  • Enterococcus faecalis
  • Enterococcus faecium
  • Enterovirus
  • Escherichia coli
  • Finegoldia magna*
  • Fusobacterium necrophorum*
  • Gardnerella vaginalis
  • Giardia lamblia*
  • Haemophilus ducreyi
  • Haemophilus influenzae
  • Haemophilus influenzae B*
  • Hepatitis B virus*
  • Hepatitis C virus*
  • HHV-1 (HSV-1)
  • HHV-2 (HSV-2)
  • HHV-4 (Epstein-Barr Virus)*
  • HHV-5 (CMV)*
  • HHV-6*
  • HHV-7*
  • HHV-7 (Roseolavirus)*
  • HIV 1*
  • HIV 2*
  • HMPV A
  • HMPV B
  • HPV 16*
  • HPV 18*
  • HPV 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66 and 68*
  • HTLV-1/2*
  • Human Rhinovirus A*
  • Human Rhinovirus B*
  • Influenza A
  • Influenza A H1N1*
  • Influenza B
  • Influenza C*
  • Kingella kingae*
  • Klebsiella oxytoca
  • Klebsiella pneumoniae
  • Lactobacillus crispatus
  • Lactobacillus gasseri
  • Lactobacillus iners
  • Lactobacillus jensenii
  • Legionella longbeachae*
  • Legionella pneumophila
  • Listeria sp*
  • Measles virus*
  • Megasphaera Type 1
  • Megasphaera Type 2
  • Megasphaera-like Type 1*
  • Megasphaera-like Type 2*
  • Microsporum audouinii/canis/ferrugineum*
  • Mobiluncus curtsisii
  • Mobiluncus mulieris
  • Moraxella catarrhalis
  • Morganella morganii
  • Mycoplasma genitalium
  • Mycoplasma hominis
  • Mycoplasma pneumoniae
  • Neisseria gonorrhoeae
  • Nocardia sp*
  • Norovirus Grp 1*
  • Norovirus Grp 2*
  • Pan bacteria*
  • Parechovirus*
  • Parvovirus B19*
  • Peptostreptococcus anaerobius*
  • Peptostreptococcus micros*
  • Peptostreptococcus prevotii*
  • Peptostreptococcus tetradius*
  • Parainfluenza virus (type 1-4)
  • Pneumocystis jirovecii*
  • Polyomavirus BK*
  • Polyomavirus JC*
  • Prevotella bivia
  • Prevotella loescheii*
  • Prevotella melaninogenicus*
  • Proteus mirabilis
  • Proteus vulgaris*
  • Pseudomonas aeruginosa
  • Rhinovirus (types A & B)
  • Rickettsia rickettsii (discriminates japonica)*
  • Rickettsia rickettsii (pan Rickettsia)*
  • Rotavirus*
  • RSV A
  • RSV B
  • Salmonella enterica serovar paratyphi*
  • Salmonella enterica serovar Typhi*
  • Salmonella species*
  • Sapovirus*
  • Serratia marcescens
  • Shigella/Ecoli screen*
  • Staphylococcus aureus
  • Staphylococcus aureus Panton-Valentine leukocidin gene*
  • Staphylococcus epidermidis
  • Staphylococcus lugdunensis*
  • Staphylococcus PAN*
  • Staphylococcus saprophyticus
  • Staphylococcus maltophilia*
  • Staphylococcus agalactiae (Group B)
  • Staphylococcus anginosis*
  • Streptococcus pneumoniae
  • Streptococcus pyogenes (Group A)
  • Treponema pallidum
  • Trichomonas spp*
  • Trichomonas vaginalis
  • Trichophyton mentagrophytes complex*
  • Trichophyton rubrum*
  • Trichophyton tonsurans/equinum*
  • Trichophyton violaceum*
  • Ureaplasma parvum*
  • Ureaplasma urealyticum
  • Varicella zoster*
  • West Nile Virus*
  • Yersinia enterocolitica*
  • Zika Virus*

*In Development

Antibiotic Resistance Targets

  • Class A β-lactamase (blaTEM)*
  • Class A β-lactamase (blaSHV)*
  • Class A β-lactamase (blaKPC)
  • Class A β-lactamase (CTX-M-Group 1)
  • Class A β-lactamase (CTX-M-Group 2)*
  • Class A β-lactamase (CTX-M-Group 8 like)*
  • Class A β-lactamase (CTX-M-Group 25 like)*
  • Class A β-lactamase (CTX-M-Group 9)*
  • Class B metallo-β-lactamase (blaNDM)
  • Class B metallo-β-lactamase (blaIMP-1 like)*
  • Class B metallo-β-lactamase (blaVIM group)*
  • Class C β-lactamase (blaFOX)*
  • Class C β-lactamase (blaACT/MIR)*
  • Class D β-lactamase (oxacillinase) (OXA-1)*
  • Class D β-lactamase (oxacillinase) (OXA-48 like)*
  • Minor ESPLs (PER)*
  • Minor ESPLs (VEB)*
  • Minor ESBLs (GES)*
  • Trimethoprim (DFR)
  • Sulfonamides (SUL)
  • Macrolides (ERM)*
  • Fluoroquinolones (QNR)
  • Vancomycin (vanA)
  • Vancomycin (vanB)
  • Methicillin (mecA)
  • Aminoglycosides (armA)*

*In Development

Antimicrobial Sensitivity

Gram Negative

  • Amoxicillin/Clavulanic Acid
  • Ampicillin
  • Aztreonam
  • Cefazolin
  • Ceftriaxone
  • Ciprofloxacin
  • Gentamicin
  • Nitrofurantoin
  • Trimethoprim/sulfamethoxazole

Gram Positive

  • Ampicillin
  • Cefoxitin Screen
  • Ceftaroline
  • Ceftriaxone
  • Chloramphenicol
  • Ciprofloxacin
  • Clindamycin
  • Daptomycin
  • Erythromycin
  • Gentamicin
  • Levofloxacin
  • Linezolid
  • Moxifloxicin
  • Nitrofurantoin
  • Oxacillin+2% NaCL
  • Penicillin
  • Rifampin
  • Streptomycin
  • Telavancin
  • Tetracycline
  • Tigecycline
  • Trimethoprim/sulfamethoxazole
  • Vancomycin